FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006764

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006764
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences705051
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTT3859.841286E-514.9824251
CCCATGT3700.001237683813.6410931
CCCAAAC3900.001840245312.9415491
CCCAGAT6100.00468572659.45612051
CAACAGA7954.376386E-49.069551
CAAGAAA13101.475213E-47.1552521
CATCATT10700.0081269926.73859071
AACTTTT10750.009282666.646363
Produced by FastQC (version 0.11.5)