FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006765

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006765
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1381678
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTTAT27951.5079422E-96.5223491
GTCAAAG15500.00100065316.11585951
CTTTAAT18351.910202E-45.96075151
CTTCAAT20953.014742E-55.9171251
CTCTTTT33501.36478775E-85.6594521
Produced by FastQC (version 0.11.5)