FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences694780
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAGG5550.00212435910.4040851
GTGAGAA5550.00212435910.4040851
TGAAGTT9352.4243288E-48.4542883
GATTCTG9150.00182548177.85371075
AAAATGC13600.00182137026.34071646
AGAAATA17850.00103859785.63619234
Produced by FastQC (version 0.11.5)