FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences785503
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT2750.003428439415.2049819
GCACACG4150.003775199411.7593476
AGCACAC5000.001188949811.154585
AGCTAAC1250.00758326858.92025615-19
AAAGTCC8258.8542694E-48.4504394
Produced by FastQC (version 0.11.5)