FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006769

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006769
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences411194
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTGAGA950.00553736529.550547
CTGAGAA1850.00608317118.9682548
GTTCGGA3255.4655777E-415.1938441
CAACGAT3100.006996816513.6534531
GTTCCGT4450.005811045411.0966261
GGCAAAT4550.00685548910.8527451
CTTTCAT8150.0066957027.79000761
Produced by FastQC (version 0.11.5)