FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences600040
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCGT2900.00443292614.6278611
ATATGCG4807.783525E-411.7324936
CCTCTGT4300.004429854511.509521
CTTCAAC7252.1125334E-49.7519081
CAAGGAA9352.8884207E-48.3178031
Produced by FastQC (version 0.11.5)