FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences736693
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCCAT5000.001014391311.3681391
CTTTAAT8300.00740694677.70431041
GGAAAAT12350.00525490856.32841731
AGAACAT12300.00531638466.32136254
Produced by FastQC (version 0.11.5)