FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2137925
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGAAT13502.6667729E-57.47384071
CTCAAAC17952.4106035E-56.42399361
CTTCAAT26507.2749026E-65.4391831
GTTCAAT18950.00213881655.32437231
CTTCCAT36601.2896999E-75.1196691
Produced by FastQC (version 0.11.5)