FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences410828
Sequences flagged as poor quality0
Sequence length100-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGACC2308.299083E-418.79292
AGCGTAG2000.00822153318.0032864
CTCCGAC3100.00601053813.9703361
ATCTTTA4050.00246352712.4467176
Produced by FastQC (version 0.11.5)