FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences530926
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT3609.0034126E-414.2267441
TTGAGCT3200.007401267513.5390387
CTCATCT5150.001015438511.3656091
CTCCCGT5852.327313E-411.2563241
CTTTAAT7652.2188153E-510.5206171
CTCTTTT10758.926228E-47.48676441
AAAGATT10150.0048006647.11410864
CTTCAAT10750.0073730136.80614951
Produced by FastQC (version 0.11.5)