FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006817

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006817
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1012269
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAA11955.2771473E-57.77536871
CTTTAAA10750.0092592476.6487051
AAAAGTA20503.0914875E-55.90687564
CAAAGGA15050.00600458775.698891
CTTTCAT19500.0033886775.1314371
Produced by FastQC (version 0.11.5)