FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences566651
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCGAGT3000.00509384614.3246872
TCGCATT3750.001439645913.3697072
CTCAGAA4200.00326453411.9891091
CCCCGCC5650.00253298810.1854371
CGTTGAT7000.00141947299.248741
CTTTGAT8055.071751E-48.9359811
ATTTTAT14550.00383323435.9327541
Produced by FastQC (version 0.11.5)