FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006853

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006853
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences711997
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCGAT6153.1974865E-511.7466971
CTCAGAA4400.004478783311.4930771
CTTCTAT7752.4171059E-611.1858881
CTCAAAT5650.002446193210.2289831
CTCTTCT7251.7010102E-49.964441
TCTATCT8450.00772660467.667953
CAAAGAA15602.2965502E-56.9463651
CTCCGCC14200.00278738356.1049741
Produced by FastQC (version 0.11.5)