FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006858

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006858
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences824455
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT4051.2336015E-515.3978989
CACACGT3901.5414173E-414.2134457
ACACGTC3700.0016709713.1090238
ATCGCAC3750.00184857912.9342359
AGCACAC5008.9691304E-512.4715415
CTTGGTC5702.969301E-410.9658861
AGAGCAC5904.1748E-410.5691033
GCACACG5400.00237722310.2646436
CTTTGGT7503.5560085E-49.260081
Produced by FastQC (version 0.11.5)