FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006863

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006863
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1564367
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAGAT4352.9651908E-413.1590761
CAAGGGG8350.0076646397.6760078
GAATCAC9400.00260367647.57620149
AAGTACC9900.00432006137.19356446
CTAAAAA15500.0082199615.53954651
CTGAAAT21253.0634215E-45.387481
CCGGGAT20209.0403843E-45.31330251
CTGGCAG24758.854509E-55.20381641
Produced by FastQC (version 0.11.5)