FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006877

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006877
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1022526
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGGT2900.00418053114.7589111
ACACGTC4152.0730388E-413.7263928
CCCAAAT7350.00239117988.7348661
CGAAGTT8550.0094761827.4953324
ATCACAT10500.0075181546.79378461
CCGCAAA14154.3299687E-46.5537221
Produced by FastQC (version 0.11.5)