FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences520423
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCGCT3102.0747933E-517.9678291
TAGATAT4758.0843014E-411.6790443
CAATTAA4700.00992213510.3258935
GTGGCGG6300.0084239988.8039367
ATCAGAA8500.00120392028.1912161
Produced by FastQC (version 0.11.5)