FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006882

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006882
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1076959
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACTT5450.001866246710.5683481
CTCAAGG8450.00772977857.66830641
CTACAAT10900.00123074417.26573941
TCCAATC10050.0047180837.12827542
CAAGAAA18708.604602E-76.93018051
CTCAAAA13903.1135607E-46.73352051
AAACTTC12400.0050374086.3547924
CAAAAAC18500.00159779775.4484121
Produced by FastQC (version 0.11.5)