FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1988065
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGGG10300.00723927476.8210936
CCCTGAT19051.7187685E-66.6466741
CTCGAAA13904.13891E-46.57893231
GTCCGCT12800.0084685296.04518461
CTTCCAG37305.638867E-115.84628151
CCCGCAA18503.483775E-45.7035651
CTTTCCT26305.5211414E-55.08188341
Produced by FastQC (version 0.11.5)