FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006889

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006889
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences432178
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCAGT2852.7473106E-722.915271
CCAATCT2359.3712576E-418.456463
ATTCCCC2900.003822681714.9560968
CTTTTGG4500.00511722211.2878911
CAAAGAT6100.00443937169.5167241
CTTTCAT6500.00748562358.931081
ATGAAAG6550.0082250558.8290447
CTTCTTT9800.00324661547.4045941
AGCGCTC2350.00262652646.763453510-14
Produced by FastQC (version 0.11.5)