FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006895

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006895
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences471263
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTGAC2000.007769905518.181241
CTTCGAG3000.004601416614.5449921
CTCCCGT3150.006359628413.8523741
TTAAACT3250.00826844413.3136093
CCGAGAC2350.00251627396.7911453120-124
AAATAAA14805.8867777E-46.38800331
Produced by FastQC (version 0.11.5)