FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006900

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006900
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences729834
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAAGCA5200.001347800710.9881891
GCATGAA7352.1906364E-49.7174461
ACTTTTG10207.738108E-69.0580585
AATTGGA7650.00354919078.3612835
CACTTTT10350.00677459646.86675454
GGTAAAA10800.0097407946.6132621
CGAAAAG12450.0054122986.31048631
Produced by FastQC (version 0.11.5)