FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences593126
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC1951.0982023E-525.2732688
CACACGT2303.9365434E-521.4273387
CACGTCT2303.9365434E-521.4273389
GCACACG3356.9839414E-414.7125456
AGCACAC4757.115574E-411.8585335
TGTACCT4650.00818229210.5984677
AGAGCAC5850.0040344849.6287243
GAGCACA6250.00695503469.01248554
CTTGTCC7250.00230413658.7693921
GAAGAGC11600.0028964866.69884061
GTATCCC2900.004702615.826841480-84
AGTCAGG3550.00125915825.552999510-14
Produced by FastQC (version 0.11.5)