FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006922

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006922
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2034069
Sequences flagged as poor quality0
Sequence length100-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAAC6550.00800719958.8608821
TCGAATT15108.1664807E-46.22024732
GATAACC16654.0096682E-46.07362947
CTTCGAA20601.6144293E-45.63483241
CATTCCA19550.0030718085.17268234
TCGATAA18300.0080241425.13129233
GAATTCA19750.00348785875.12034
Produced by FastQC (version 0.11.5)