FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences616641
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGCTA700.001086956641.1885458
GTTTCGA2550.001534819517.1491131
CTCAGAT3100.005640349414.1065291
CTGTGGA6355.151707E-410.3299771
CTCCAGA6950.00117983729.4381811
CAAAAGT6600.0081923998.8343921
CCATGAC7750.0031771658.4639171
CTTTGAT8750.0094508677.49661251
CTTCAGC11300.00158104927.09487631
CTCCACC11000.0095596686.6257941
CAAAGAA13450.00136956926.5026381
Produced by FastQC (version 0.11.5)