FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006927

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006927
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences633939
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1600.002356022422.3453777
GCAGTGT2850.003657500715.0572913
ACACGTC2950.004607102414.5434318
CTCTAAA3300.00942412513.0534571
CACAAGA4800.00895793810.4699591
TAGCCCG2700.00173760996.3690895-99
Produced by FastQC (version 0.11.5)