FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences781341
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGCTG3250.008443003513.2731312
TAAGGTG3900.001894413712.8920459
GAATCAC5050.001006775711.3785529
TTGTGGA7800.00384441328.2877449
CTTTGTT11750.00267238086.75102661
Produced by FastQC (version 0.11.5)