FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497419
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCGC100.007881101139.957582
TAATCTC2253.4802193E-521.7711774
GTTCTGG5850.0042423799.5697496
Produced by FastQC (version 0.11.5)