FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006957

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006957
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences987315
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCTAT3050.00523754514.2662411
CTCAGAA6053.4554052E-410.7881081
CTCCTCT7100.00150247499.1926831
CTATGAG8508.055427E-48.5317711
TCAGAAT12150.00372934396.5402963
Produced by FastQC (version 0.11.5)