FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences987146
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCCAA3305.485624E-415.1900765
CCAGGCT5050.001032992311.3442148
CCAAAAT10500.00706700056.8373521
CCAGAAT13200.0094169795.98268271
CGAAAAA17300.00445425465.39478871
Produced by FastQC (version 0.11.5)