FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences598328
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTTAAG2909.01953E-418.562468145
CCCTTCT4450.00432951511.5448431
CTTGAAT6254.173208E-410.5684791
CACAAAT4950.00955681710.3786971
CAAAGAA16305.3761505E-77.6544031
CTTTTAT12706.594711E-46.9346971
CTTTCTT15950.0084932515.52167131
Produced by FastQC (version 0.11.5)