FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006966

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006966
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences769009
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTTAG4350.004220312511.5851581
CTCCGAA6456.664943E-410.0456021
ACTCTGC6450.00762938758.9120066
TAAAACT8900.00139119168.0733783
AGGGTCA3550.00595555.2641275-79
Produced by FastQC (version 0.11.5)