FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006977

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006977
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1543294
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACAAT11452.6680573E-58.2124231
GGTAAAT15300.0063189335.67313771
AATTTTA21200.00172130175.0623165
TGATGTA20000.0045346085.0131914
Produced by FastQC (version 0.11.5)