FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences815184
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTTAA15201.1672642E-46.6790111
ACTTTCT14203.9207595E-46.6069336
CTTTAAT12200.0037396696.53823571
CATAAAT14906.6346186E-46.326811
CTTCAAA15007.1937195E-46.28463131
AATATTA15850.0095419685.46416145
AAATATT25401.1560066E-45.1152124
Produced by FastQC (version 0.11.5)