FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006988

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006988
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences700503
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCAAT10601.0286893E-58.8563831
ATTCAGT6600.0088387598.7531631
CAATTCA6700.0099955758.62251951
CCAAAAT10100.00457646467.14986041
ATCTGAT11900.00300787326.67520571
AAGATAT14350.00331940396.0103113
AAAGATT17156.2253216E-45.86720852
Produced by FastQC (version 0.11.5)