FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006989

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006989
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1173324
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT9653.6223224E-48.1464951
GGGGGGG2005.611891E-47.82236690-94
CAATGAT12550.00585199246.26403761
CTTCAAA19156.986222E-55.97113131
CTTTTGC24101.5725527E-65.93086961
CTTTTAT19756.786658E-45.4278711
CAACAAA17700.0061485465.24898671
GATTTTC25501.5599985E-45.018935
Produced by FastQC (version 0.11.5)