FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences665316
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAC3250.00870763913.2108511
GTTGTAA6759.0879344E-510.6012991
GGTTATT5450.00196178610.5040411
GTTGGAA7450.0026245968.6446851
CATCAAG9600.00304730287.4540391
CATCAAT11800.00302855466.6707331
Produced by FastQC (version 0.11.5)