FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1230566
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACGG6600.0086243598.7804211
TCCGACA11450.00199392726.94215632
CTCCGAA11950.0030468936.6679771
GTTTTGT14250.00281719986.10008241
CTTTTAA16954.8566196E-45.9831191
GTTTTAT19500.00286787965.20071131
Produced by FastQC (version 0.11.5)