FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446273
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAC3000.004364473714.660911
ATCCAAG4300.00391464711.7005986
CAAAAGA9953.949189E-58.840751
CATGAAA6650.0083056088.8185931
CAAAAAG12250.00347594266.58244941
CTTTTTC17600.004249635.41454031
Produced by FastQC (version 0.11.5)