FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007037

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007037
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences959677
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGGGC5700.00701509510.821199145
CTTTCGC8255.57489E-48.8530871
ATTCACC8609.436854E-48.3967666
TGATCCG10200.00504173527.0796269
CCTTGAT13600.00151828986.44452671
CTCCTGC18001.4337023E-46.08649731
CTGAAAG15800.008087085.5471881
TTGATAT21000.00133952075.1582823
CATCAAG18800.009636755.05049851
Produced by FastQC (version 0.11.5)