Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005007039 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1498395 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTAAAAT | 1170 | 3.657828E-5 | 8.007936 | 1 |
CGAGAAT | 1050 | 0.0068113357 | 6.8639445 | 1 |
ACAAATG | 1505 | 0.005759341 | 5.7208543 | 3 |
CTACAAT | 1560 | 0.008147622 | 5.5439553 | 1 |
CATAAAG | 1720 | 0.003978244 | 5.4472585 | 1 |
GGTCCAA | 350 | 0.0051676882 | 5.3283286 | 10-14 |
CAAAAAT | 2975 | 9.993728E-6 | 5.087394 | 1 |
CGATGAT | 2565 | 1.3847518E-4 | 5.0576434 | 1 |