FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences647770
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2900.003922037314.9001137
CCTACAG3000.004771067314.4670951
CACGTCT3000.00491282914.4034429
CCCACAT5054.1465846E-614.3238571
ATTGGGT3050.005482271314.1673216
Produced by FastQC (version 0.11.5)