FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007055

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007055
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474220
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1251.3326688E-534.530997
ACACGTC1754.0038394E-628.775838
CACGTCT1754.0038394E-628.775839
TGGAGGC5800.00314415049.92277
CTTCCAT6250.0057451889.2238291
GGAGGCG6550.0085594438.7865128
Produced by FastQC (version 0.11.5)