FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007060

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007060
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences701385
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTAGCT2800.003050567815.4736167
AATGAGC5500.00196317910.5033036
CTCAAAG7900.0039663268.25886251
CTTCAAA11201.792749E-47.76726341
CCGCCTA3100.0074386285.590467510-14
Produced by FastQC (version 0.11.5)