FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007063

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007063
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences906225
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGATCT7100.00156572819.1510343
TAGAAGT7150.00166909839.0870413
TTACCCA6550.0083413328.8158239
CTTTGAT16608.9630703E-77.413561
CAAAGAT17101.1013235E-56.77344941
TTAAATA14153.7299504E-46.63426452
AAATATT26855.059933E-55.1076774
Produced by FastQC (version 0.11.5)