FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences754294
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGCGTA3150.006705691613.7435343
TTTAAGC4350.00415489911.6093777
CCCGCTT4450.00457374611.4609371
CTCAGAT4600.005855556611.087211
CTCAAAC5600.002117386810.40840151
AGATCAC6150.00459962949.4775681
CTCTATT7750.00318872748.4610231
TATCATG8400.00718812927.73022469
CTTCAAT11700.00229270786.8499731
CTTCTAT10850.0084072286.71509741
CTTTAAA14404.1380414E-46.5775311
CAAAGAT13600.00155969496.4287181
Produced by FastQC (version 0.11.5)