FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007076

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007076
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2803415
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCTT11400.00191253266.9703731
CTTTTAG16655.7169695E-56.5079651
GTCCCAT17802.0602074E-56.493341
CTACGAT20001.12325084E-45.7790731
CTTACCA21304.4899396E-55.7655071
CAAAAGT30805.806123E-75.3944271
CTTAAAG19300.00261375525.2400921
Produced by FastQC (version 0.11.5)