Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005007077 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 860428 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGAAC | 480 | 0.009179011 | 10.436257 | 1 |
TTTGAGT | 615 | 0.0055161146 | 9.271126 | 3 |
CGAAAAA | 1635 | 0.0023697708 | 5.6900167 | 1 |
GATTTCC | 1540 | 0.007986859 | 5.5533223 | 5 |
CTTTTAT | 1565 | 0.009111309 | 5.4872518 | 1 |
TTTTCTC | 1980 | 0.0042454936 | 5.0391254 | 7 |