FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007079

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007079
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences934463
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTTCT11151.9376183E-58.4234053
CTCTGCT9950.0035481687.33955141
CCATAAT12455.572112E-47.0388951
CAAATCT10300.0055167167.0142623
GATGTTC12250.00406566176.4864355
CAAAGGA17406.1169866E-45.8758591
TGATGTT16250.00196751255.7797524
CAAAAAC15750.00782004655.56407931
CTGCAAA21050.00119112985.20393371
AGAATTT18200.00749664245.16049243
Produced by FastQC (version 0.11.5)