FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3853558
Sequences flagged as poor quality0
Sequence length100-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCAAT11903.747687E-47.28836061
CGAAGAC15450.0071065495.61368851
CTCAAAT43052.2009772E-105.372451
CTCCAAG26002.9216582E-55.28172541
CTCCGAT26453.882974E-55.1918661
CTCAAGT24203.0434752E-45.07725671
TCAGCTA23008.212351E-45.02484462
Produced by FastQC (version 0.11.5)